C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntrophin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144593 Sntg1-003 ENSMUSG00000025909 10090 - 1:8675973-9299282 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverPlacentaENSMUST00000144593
Transcript ID Adrenal Breast Colon Liver Placenta
ENSMUST00000144593 0.192±0.00 0.010±0.00 0.069±0.07 0.025±0.01 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276467 SNTG1-201 protein_coding Homo_sapiens 0 313
ENST00000517473 SNTG1-003 protein_coding Homo_sapiens 0 313
ENST00000518864 SNTG1-002 protein_coding Homo_sapiens 0 311
ENST00000520825 SNTG1-004 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000522124 SNTG1-001 protein_coding Homo_sapiens 0 311
ENST00000620202 SNTG1-202 protein_coding Homo_sapiens 0 313

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