C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAD23a homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144675 Rad23a-007 ENSMUSG00000003813 10090 - 8:84834019-84838047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000144675
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000144675 50.577±0.00 96.181±0.00 64.393±19.71 40.491±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316856 RAD23A-001 protein_coding Homo_sapiens 0 510
ENST00000316939 GADD45GIP1-001 protein_coding Homo_sapiens 0 219
ENST00000586375 RAD23A-010 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000586534 RAD23A-002 protein_coding Homo_sapiens 0 531
ENST00000588826 RAD23A-007 processed_transcript Homo_sapiens 0 303
ENST00000590881 RAD23A-008 protein_coding Homo_sapiens 0 409
ENST00000591499 RAD23A-003 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000592268 RAD23A-005 protein_coding Homo_sapiens 0 324
ENST00000593114 RAD23A-004 nonsense_mediated_decay Homo_sapiens 0 510

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