C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD23 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591499 RAD23A-003 ENSG00000179262 9606 + 19:12945855-12953269 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryPlacentaENST00000591499
Transcript ID Bladder Liver Muscle Ovary Placenta
ENST00000591499 1.116±0.00 9.837±7.91 469.771±0.00 16.218±10.22 17.724±3.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109761 Rad23a-001 protein_coding Mus_musculus 0 828
ENSMUST00000003911 Rad23a-002 protein_coding Mus_musculus 0 813
ENSMUST00000128035 Rad23a-003 protein_coding Mus_musculus 0 597
ENSMUST00000125711 Rad23a-004 retained_intron Mus_musculus 0 568
ENSMUST00000144675 Rad23a-007 protein_coding Mus_musculus 0 531
ENSDART00000124615 rad23b-201 protein_coding Danio_rerio 0 207

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