C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ERGIC and golgi 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144707 Ergic3-003 ENSMUSG00000005881 10090 + 2:156008223-156011233 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000144707
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000144707 86.004±0.00 198.256±0.00 138.049±17.05 83.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0005FV CIL_0005FV_0002 CGP 2:155973279-156018279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123923 DHX29-202 protein_coding Danio_rerio 0.000003 57
ENSDART00000129467 DHX29-201 protein_coding Danio_rerio 0.000003 57
ENST00000279052 ERGIC3-005 retained_intron Homo_sapiens 0 375
ENST00000348547 ERGIC3-001 protein_coding Homo_sapiens 0 695
ENST00000357394 ERGIC3-003 protein_coding Homo_sapiens 0 695
ENST00000411577 ERGIC3-011 protein_coding Homo_sapiens 0 375
ENST00000413587 ERGIC3-017 protein_coding Homo_sapiens 0 477
ENST00000416206 ERGIC3-006 protein_coding Homo_sapiens 0 695
ENST00000438317 ERGIC3-010 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000447986 ERGIC3-004 retained_intron Homo_sapiens 0 695
ENST00000461043 ERGIC3-012 retained_intron Homo_sapiens 0 712
ENST00000482338 ERGIC3-014 processed_transcript Homo_sapiens 0 228
ENST00000486268 ERGIC3-018 processed_transcript Homo_sapiens 0 375
ENST00000489071 ERGIC3-019 processed_transcript Homo_sapiens 0 324
ENST00000496172 ERGIC3-013 retained_intron Homo_sapiens 0 616

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