C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi associated, gamma adaptin ear containing, ARF binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144779 Gga2-004 ENSMUSG00000030872 10090 - 7:121988765-122002491 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144779 19.372±7.20 7.399±0.88 18.359±0.87 13.935±8.89 19.809±5.46 4.478±0.53 6.540±1.40 12.777±3.53 9.043±5.98 7.568±2.48 3.709±0.71 17.949±6.40 45.812±31.45 2.467±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D5 CIL_0006D5_0002 CGP 7:121922839-122021222
CIL_0006D4 CIL_0006D4_0002 CGP 7:121986722-122067263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309859 GGA2-001 protein_coding Homo_sapiens 0 1020
ENST00000566685 GGA2-016 processed_transcript Homo_sapiens 0 281
ENST00000568922 GGA2-014 retained_intron Homo_sapiens 0 603
ENST00000569182 GGA2-013 processed_transcript Homo_sapiens 1.99965e-42 176

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