C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen triple helix repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144800 Cthrc1-004 ENSMUSG00000054196 10090 + 15:39084070-39087121 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverMuscleOvaryTestisENSMUST00000144800
Transcript ID Colon Kidney Liver Muscle Ovary Testis
ENSMUST00000144800 0.291±0.08 0.236±0.08 0.105±0.00 0.144±0.06 0.538±0.28 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060D CIL_00060D_0002 CGP 15:39006280-39087121
CIL_0004T6 CIL_0004T6_0003 CGP 15:39076932-39112716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330295 CTHRC1-001 protein_coding Homo_sapiens 0 532
ENST00000520337 CTHRC1-003 protein_coding Homo_sapiens 0 532
ENST00000520880 CTHRC1-002 protein_coding Homo_sapiens 0 449

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