C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen triple helix repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520337 CTHRC1-003 ENSG00000164932 9606 + 8:103372433-103382989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyOvaryENST00000520337
Transcript ID Adrenal Brain Kidney Ovary
ENST00000520337 0.723±0.00 0.147±0.00 0.218±0.00 0.671±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060D CIL_00060D_0001 CGP 8:103298433-103382997
CIL_0004T6 CIL_0004T6_0002 CGP 8:103371515-103415189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0005615 IDA extracellular space

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067072 Cthrc1-001 protein_coding Mus_musculus 0 815
ENSMUST00000144800 Cthrc1-004 retained_intron Mus_musculus 0 532

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