C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: family with sequence similarity 20, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144972 Fam20a-003 ENSMUSG00000020614 10090 - 11:109674639-109682979 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleOvaryENSMUST00000144972
Transcript ID Breast Muscle Ovary
ENSMUST00000144972 3.472±0.19 0.203±0.00 2.782±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AG CIL_0003AG_0003 CGP 11:109649405-109722279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226094 FAM20A-003 processed_transcript Homo_sapiens 0 946
ENST00000375556 FAM20A-006 retained_intron Homo_sapiens 1e-34 152
ENST00000590074 FAM20A-002 nonsense_mediated_decay Homo_sapiens 0 662
ENST00000590873 FAM20A-005 nonsense_mediated_decay Homo_sapiens 0.00000000004 73
ENST00000592554 FAM20A-001 protein_coding Homo_sapiens 0 662
ENST00000592847 FAM20A-004 processed_transcript Homo_sapiens 0 774

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