C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin specific peptidase 46 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000145016  |
Usp46-004 |
ENSMUSG00000054814 |
10090 | - |
5:74029316-74065744  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001CQ | CIL_0001CQ_0002 | CGP | 5:73651380-74068430 |
| CIL_00082M | CIL_00082M_0002 | VISTA | 5:73965657-74568205 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001662 | IMP | behavioral fear response |
| GO:0005575 | ND | cellular_component |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0008343 | IMP | adult feeding behavior |
| GO:0036459 | IEA | ubiquitinyl hydrolase activity |
| GO:0048149 | IMP | behavioral response to ethanol |
| GO:0060013 | IMP | righting reflex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000441222
|
USP46-001 | protein_coding | Homo_sapiens | 0 | 544 |
|
ENST00000451218
|
USP46-003 | protein_coding | Homo_sapiens | 0 | 409 |
|
ENST00000502443
|
USP46-009 | retained_intron | Homo_sapiens | 0 | 409 |
|
ENST00000503060
|
USP46-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 558 |
|
ENST00000504078
|
USP46-006 | processed_transcript | Homo_sapiens | 0.0000000001 | 71 |
|
ENST00000506707
|
USP46-007 | processed_transcript | Homo_sapiens | 0 | 547 |
|
ENST00000508499
|
USP46-005 | protein_coding | Homo_sapiens | 0 | 558 |
|
ENST00000512656
|
USP46-008 | nonsense_mediated_decay | Homo_sapiens | 6e-37 | 158 |
|
ENST00000514536
|
USP46-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 544 |
