C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451218 USP46-003 ENSG00000109189 9606 - 4:52594178-52659290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000451218
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000451218 1.292±0.00 0.713±0.00 1.308±0.00 8.630±2.53 1.318±0.42 1.064±0.58 3.077±0.43 1.668±0.95 1.031±0.29 1.021±0.28 2.279±0.00 1.906±0.92 1.507±0.28 2.837±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CQ CIL_0001CQ_0001 CGP 4:52051331-52659335

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119154 Usp46-002 protein_coding Mus_musculus 0 1908
ENSMUST00000068058 Usp46-001 protein_coding Mus_musculus 0 1700
ENSMUST00000128750 Usp46-003 processed_transcript Mus_musculus 0 1482
ENSMUST00000150009 Usp46-005 retained_intron Mus_musculus 0 484
ENSMUST00000145016 Usp46-004 protein_coding Mus_musculus 0 409
ENSMUST00000152408 Usp46-006 processed_transcript Mus_musculus 0 313

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