C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 5A (MRF1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145179 Arid5a-008 ENSMUSG00000037447 10090 + 1:36307754-36319214 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000145179
Transcript ID Ovary Testis
ENSMUST00000145179 2.212±0.00 1.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070A CIL_00070A_0002 CGP 1:36264597-36324029
CIL_0003NZ CIL_0003NZ_0002 CGP 1:36307733-36369181

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357485 ARID5A-001 protein_coding Homo_sapiens 0 488
ENST00000412735 ARID5A-002 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000454558 ARID5A-004 protein_coding Homo_sapiens 0 488
ENST00000467498 ARID5A-007 retained_intron Homo_sapiens 1e-26 124
ENST00000470579 ARID5A-006 retained_intron Homo_sapiens 3e-18 97
ENST00000497920 ARID5A-005 retained_intron Homo_sapiens 0 398

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