C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor coactivator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145280 Ncoa2-007 ENSMUSG00000005886 10090 - 1:13190106-13299722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000145280
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000145280 72.741±0.00 58.782±0.00 46.370±10.57 61.570±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ME CIL_0007ME_0002 UCNEbase 1:13097855-13197231
CIL_0003BO CIL_0003BO_0002 CGP 1:13113457-13374083
CIL_0003BN CIL_0003BN_0002 CGP 1:13139105-13589910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003682 IDA chromatin binding
GO:0003713 IDA transcription coactivator activity
GO:0005102 IDA receptor binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030375 IDA thyroid hormone receptor coactivator activity
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:2000273 IDA positive regulation of receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000452400 NCOA2-001 protein_coding Homo_sapiens 0 468
ENST00000518287 NCOA2-002 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000519724 NCOA2-004 protein_coding Homo_sapiens 1e-23 113
ENST00000520416 NCOA2-003 protein_coding Homo_sapiens 0.0000000000005 79

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