C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145449 Snx1-003 ENSMUSG00000032382 10090 - 9:66109142-66124797 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H0 CIL_0008H0_0002 VISTA 9:65525988-66127110

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261889 SNX1-003 protein_coding Homo_sapiens 0 368
ENST00000380285 SNX1-005 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000558040 SNX1-009 protein_coding Homo_sapiens 0 329
ENST00000559061 SNX1-008 protein_coding Homo_sapiens 2e-32 143
ENST00000559389 SNX1-007 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000559844 SNX1-001 protein_coding Homo_sapiens 0 359
ENST00000560260 SNX1-006 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000560829 SNX1-004 protein_coding Homo_sapiens 3e-31 141
ENST00000561026 SNX1-002 protein_coding Homo_sapiens 0 342

Loading