| Transcript ID | Muscle |
|---|---|
| ENSMUST00000145482 | 1.480±0.22 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PRP40 pre-mRNA processing factor 40 homolog B (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000145482  |
Prpf40b-001 |
ENSMUSG00000023007 |
10090 | + |
15:99295271-99317018  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008150 | ND | biological_process |
| GO:0008380 | IEA | RNA splicing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261897
|
PRPF40B-002 | protein_coding | Homo_sapiens | 0 | 3775 |
|
ENST00000335154
|
FMNL3-002 | protein_coding | Homo_sapiens | 0 | 603 |
|
ENST00000380281
|
PRPF40B-001 | protein_coding | Homo_sapiens | 0 | 4052 |
|
ENST00000546626
|
PRPF40B-014 | retained_intron | Homo_sapiens | 0 | 353 |
|
ENST00000548399
|
PRPF40B-012 | retained_intron | Homo_sapiens | 0 | 403 |
|
ENST00000548436
|
PRPF40B-009 | retained_intron | Homo_sapiens | 0 | 789 |
|
ENST00000548825
|
PRPF40B-019 | protein_coding | Homo_sapiens | 0 | 4065 |
|
ENST00000549547
|
PRPF40B-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 643 |
|
ENST00000551111
|
PRPF40B-011 | retained_intron | Homo_sapiens | 0 | 689 |
|
ENST00000551269
|
PRPF40B-017 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000551418
|
PRPF40B-010 | retained_intron | Homo_sapiens | 0 | 446 |
