C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145671 Itga3-003 ENSMUSG00000001507 10090 - 11:95063161-95076797 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000145671
Transcript ID Brain Ovary
ENSMUST00000145671 16.643±0.00 23.563±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007722 ITGA3-020 protein_coding Homo_sapiens 0 645
ENST00000320031 ITGA3-001 protein_coding Homo_sapiens 0 645
ENST00000505306 ITGA3-002 retained_intron Homo_sapiens 0 645
ENST00000506401 ITGA3-003 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000508100 ITGA3-009 retained_intron Homo_sapiens 0 254
ENST00000570989 ITGA3-019 retained_intron Homo_sapiens 4e-30 137

Loading