C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000506401  |
ITGA3-003 |
ENSG00000005884 |
9606 | + |
17:50055968-50076995  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007QJ | CIL_0007QJ_0001 | VISTA | 17:49459872-50061823 |
| CIL_00088W | CIL_00088W_0001 | VISTA | 17:49956976-50560219 |
| CIL_0004N5 | CIL_0004N5_0002 | CGP | 17:49990005-50090481 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0007155 | IEA | cell adhesion |
| GO:0007229 | IEA | integrin-mediated signaling pathway |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120375
|
Itga3-004 | protein_coding | Mus_musculus | 0 | 1002 |
|
ENSMUST00000001548
|
Itga3-001 | protein_coding | Mus_musculus | 0 | 1002 |
|
ENSMUST00000107739
|
Itga3-002 | protein_coding | Mus_musculus | 0 | 1002 |
|
ENSMUST00000145671
|
Itga3-003 | protein_coding | Mus_musculus | 0 | 252 |
