C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor kinase-interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146044 Git2-007 ENSMUSG00000041890 10090 - 5:114727411-114743868 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungOvaryENSMUST00000146044
Transcript ID Adrenal Breast Colon Heart Liver Lung Ovary
ENSMUST00000146044 4.250±1.02 7.577±2.95 3.136±1.00 1.464±0.00 1.156±0.08 7.577±0.00 5.974±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GG CIL_0001GG_0003 CGP 5:114707760-114775517
CIL_0001GH CIL_0001GH_0003 CGP 5:114727407-114806200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0048266 IMP behavioral response to pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354574 GIT2-201 protein_coding Homo_sapiens 0 782
ENST00000355312 GIT2-001 protein_coding Homo_sapiens 0 538
ENST00000361006 GIT2-004 protein_coding Homo_sapiens 0 1003
ENST00000457474 GIT2-010 protein_coding Homo_sapiens 0 782
ENST00000546613 GIT2-017 processed_transcript Homo_sapiens 0 335
ENST00000547815 GIT2-006 protein_coding Homo_sapiens 0 228
ENST00000548000 GIT2-018 processed_transcript Homo_sapiens 0 392
ENST00000548655 GIT2-019 processed_transcript Homo_sapiens 0 285
ENST00000549524 TCHP-010 retained_intron Homo_sapiens 0.000000000001 81
ENST00000549999 GIT2-009 retained_intron Homo_sapiens 0 525
ENST00000550186 GIT2-005 protein_coding Homo_sapiens 0 902
ENST00000551209 GIT2-011 protein_coding Homo_sapiens 0 538
ENST00000551455 GIT2-002 retained_intron Homo_sapiens 0 228
ENST00000552978 GIT2-023 retained_intron Homo_sapiens 0 401
ENST00000553118 GIT2-008 protein_coding Homo_sapiens 0 538

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