C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146088 Ttc38-001 ENSMUSG00000035944 10090 + 15:85832306-85858822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146088 5.057±0.99 6.190±1.03 10.834±0.98 1.257±0.25 3.765±0.93 12.965±1.18 3.369±0.29 8.744±0.61 10.380±7.41 6.411±0.37 1.434±0.18 4.685±1.82 5.311±2.47 0.461±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BF CIL_0008BF_0002 VISTA 15:85812646-86415385
CIL_0007IM CIL_0007IM_0002 CGP 15:85814676-85858822
CIL_0007IN CIL_0007IN_0002 CGP 15:85832306-85876572

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381031 TTC38-001 protein_coding Homo_sapiens 0 1399
ENST00000417709 TTC38-002 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000421359 TTC38-005 protein_coding Homo_sapiens 0 647
ENST00000422713 TTC38-003 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000451998 TTC38-006 nonsense_mediated_decay Homo_sapiens 0 329

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