C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rap guanine nucleotide exchange factor (GEF) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146214 Rapgef3-014 ENSMUSG00000022469 10090 - 15:97750357-97757502 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YT CIL_0005YT_0002 CGP 15:97711019-97767972
CIL_0002OC CIL_0002OC_0002 CGP 15:97744770-97792692

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389212 RAPGEF3-017 protein_coding Homo_sapiens 0 566
ENST00000395360 RAPGEF3-002 retained_intron Homo_sapiens 0 429
ENST00000405493 RAPGEF3-201 protein_coding Homo_sapiens 0 566
ENST00000449771 RAPGEF3-001 protein_coding Homo_sapiens 0 566
ENST00000473777 RAPGEF3-008 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000479866 RAPGEF3-004 retained_intron Homo_sapiens 0 566
ENST00000482843 RAPGEF3-005 retained_intron Homo_sapiens 0 566
ENST00000488250 RAPGEF3-006 retained_intron Homo_sapiens 2.8026e-45 187
ENST00000547856 RAPGEF3-016 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000548434 RAPGEF3-014 nonsense_mediated_decay Homo_sapiens 4.2039e-45 185
ENST00000548919 RAPGEF3-007 protein_coding Homo_sapiens 5.60519e-45 187
ENST00000549151 RAPGEF3-018 protein_coding Homo_sapiens 0 566

Loading