C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rap guanine nucleotide exchange factor (GEF) 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000548434  |
RAPGEF3-014 |
ENSG00000079337 |
9606 | - |
12:47738744-47741602  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005YT | CIL_0005YT_0001 | CGP | 12:47709734-47771040 |
| CIL_0002OC | CIL_0002OC_0001 | CGP | 12:47734672-47782753 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005085 | IEA | guanyl-nucleotide exchange factor activity |
| GO:0007264 | IEA | small GTPase mediated signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000123397
|
Rapgef3-004 | retained_intron | Mus_musculus | 0 | 736 |
|
ENSMUST00000175894
|
Rapgef3-018 | nonsense_mediated_decay | Mus_musculus | 0 | 736 |
|
ENSMUST00000177352
|
Rapgef3-007 | protein_coding | Mus_musculus | 0 | 736 |
|
ENSMUST00000126854
|
Rapgef3-005 | protein_coding | Mus_musculus | 0 | 736 |
|
ENSMUST00000128775
|
Rapgef3-003 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000129223
|
Rapgef3-001 | protein_coding | Mus_musculus | 0 | 592 |
|
ENSMUST00000134885
|
Rapgef3-002 | protein_coding | Mus_musculus | 0 | 507 |
|
ENSMUST00000155810
|
Rapgef3-015 | retained_intron | Mus_musculus | 0 | 459 |
|
ENSMUST00000146214
|
Rapgef3-014 | retained_intron | Mus_musculus | 4.2039e-45 | 185 |
|
ENSMUST00000125002
|
Rapgef3-016 | retained_intron | Mus_musculus | 9e-27 | 124 |
