C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: structure specific recognition protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146530 Ssrp1-005 ENSMUSG00000027067 10090 + 2:85040112-85041022 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryENSMUST00000146530
Transcript ID Adrenal Breast Colon Liver Lung Ovary
ENSMUST00000146530 20.671±2.10 24.490±4.60 18.917±6.07 10.897±1.75 16.259±0.70 37.015±8.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NZ CIL_0002NZ_0002 CGP 2:84998583-85047109

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278412 SSRP1-001 protein_coding Homo_sapiens 0 664
ENST00000293880 SSRP1-002 retained_intron Homo_sapiens 0 424
ENST00000526696 SSRP1-004 protein_coding Homo_sapiens 0 664
ENST00000529002 SSRP1-003 protein_coding Homo_sapiens 0 505

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