C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: structure specific recognition protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293880 SSRP1-002 ENSG00000149136 9606 - 11:57325986-57335851 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLungENST00000293880
Transcript ID Bladder Kidney Lung
ENST00000293880 0.223±0.00 0.261±0.00 0.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LO CIL_0002LO_0002 CGP 11:57325985-57370600

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168266 Ssrp1-201 protein_coding Mus_musculus 0 987
ENSMUST00000130729 Ssrp1-002 protein_coding Mus_musculus 0 987
ENSMUST00000077798 Ssrp1-001 protein_coding Mus_musculus 0 987
ENSMUST00000135414 Ssrp1-004 processed_transcript Mus_musculus 0 525
ENSMUST00000146530 Ssrp1-005 processed_transcript Mus_musculus 0 424
ENSMUST00000142359 Ssrp1-006 processed_transcript Mus_musculus 0 375
ENSMUST00000123467 Ssrp1-003 processed_transcript Mus_musculus 0 361
ENSMUST00000145097 Ssrp1-007 processed_transcript Mus_musculus 0 322
ENSMUST00000127069 Ssrp1-008 processed_transcript Mus_musculus 0 224
ENSDART00000003895 ssrp1b-201 protein_coding Danio_rerio 1e-34 154
ENSDART00000100268 ssrp1b-202 protein_coding Danio_rerio 1e-34 154
ENSDART00000142187 ssrp1b-001 protein_coding Danio_rerio 1e-34 154
ENSDART00000131296 ssrp1b-002 protein_coding Danio_rerio 1e-34 154

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