C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IG
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464434 MYO1G-002 ENSG00000136286 9606 - 7:44968523-44979088 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleTestisENST00000464434
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Testis
ENST00000464434 0.040±0.00 0.404±0.00 0.261±0.09 0.049±0.00 0.081±0.00 0.041±0.00 0.026±0.00 0.216±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SE CIL_0000SE_0001 CGP 7:44876293-44979098
CIL_0000SD CIL_0000SD_0001 CGP 7:44962662-45076469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003459 Myo1g-001 protein_coding Mus_musculus 0 1784
ENSMUST00000144725 Myo1g-002 nonsense_mediated_decay Mus_musculus 0 1404
ENSMUST00000156878 Myo1g-004 retained_intron Mus_musculus 0 1024
ENSMUST00000131823 Myo1g-006 retained_intron Mus_musculus 0 377
ENSMUST00000146536 Myo1g-005 nonsense_mediated_decay Mus_musculus 0 346
ENSMUST00000151174 Myo1c-009 retained_intron Mus_musculus 1e-30 139
ENSMUST00000108431 Myo1c-004 protein_coding Mus_musculus 1e-30 139
ENSMUST00000102504 Myo1c-003 protein_coding Mus_musculus 1e-30 139
ENSMUST00000069057 Myo1c-001 protein_coding Mus_musculus 1e-30 139
ENSMUST00000102505 Myo1c-002 protein_coding Mus_musculus 1e-30 139
ENSMUST00000148659 Myo1c-006 retained_intron Mus_musculus 2e-24 119
ENSDART00000028997 myo9ab-201 protein_coding Danio_rerio 6e-19 100
ENSDART00000045539 myo5c-201 protein_coding Danio_rerio 0.00000000000006 84
ENSDART00000153975 myo5c-001 protein_coding Danio_rerio 0.00000000000006 84
ENSDART00000015558 myo6a-201 protein_coding Danio_rerio 0.00000000000006 84
ENSDART00000135066 myo6a-001 protein_coding Danio_rerio 0.00000000000006 84
ENSDART00000136768 myo6a-002 protein_coding Danio_rerio 0.00000000000006 84
ENSDART00000150014 myo6a-003 retained_intron Danio_rerio 0.0000000000008 81
ENSDART00000152782 myo6a-004 protein_coding Danio_rerio 0.000000000003 79

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