C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cancer susceptibility candidate 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000147065  |
Casc3-003 |
ENSMUSG00000078676 |
10090 | + |
11:98810161-98822537  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098Y | CIL_00098Y_0002 | VISTA | 11:98447152-99051430 |
| CIL_0002GG | CIL_0002GG_0002 | CGP | 11:98767932-98807859 |
| CIL_0007GO | CIL_0007GO_0002 | CGP | 11:98795516-98833814 |
| CIL_0002GI | CIL_0002GI_0002 | CGP | 11:98804905-98853697 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000264645
|
CASC3-001 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000418132
|
CASC3-004 | retained_intron | Homo_sapiens | 0 | 547 |
|
ENST00000474190
|
CASC3-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 507 |
