C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147265 Srsf3-003 ENSMUSG00000071172 10090 + 17:29032673-29042243 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147265 6.700±2.97 6.531±1.73 19.565±0.00 22.444±17.05 7.492±2.66 7.313±1.85 4.975±2.12 3.144±0.56 10.769±9.03 10.509±0.66 3.870±0.56 10.287±3.02 8.826±4.39 2.919±1.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339436 SRSF3-003 retained_intron Homo_sapiens 0 1736
ENST00000373715 SRSF3-001 protein_coding Homo_sapiens 0 532
ENST00000436597 AC092106.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000458090 AC009963.6-001 processed_pseudogene Homo_sapiens 0 403
ENST00000477442 SRSF3-002 nonsense_mediated_decay Homo_sapiens 0 848
ENST00000537438 RP11-137N23.1-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000613941 SRSF3-006 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000614136 SRSF3-005 retained_intron Homo_sapiens 0 1016
ENST00000620242 SRSF3-008 retained_intron Homo_sapiens 0 305
ENST00000620389 SRSF3-004 retained_intron Homo_sapiens 0 2579
ENST00000620941 SRSF3-007 protein_coding Homo_sapiens 0 475

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