C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613941 SRSF3-006 ENSG00000112081 9606 + 6:36594353-36599845 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonOvaryPlacentaTestisENST00000613941
Transcript ID Adipose Adrenal Brain Breast Colon Ovary Placenta Testis
ENST00000613941 81.892±0.00 111.604±0.00 34.369±19.19 66.047±0.00 40.465±0.00 115.389±0.00 90.301±0.00 71.188±8.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130216 Srsf3-001 protein_coding Mus_musculus 0 305
ENSMUST00000037776 Srsf3-002 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000147265 Srsf3-003 retained_intron Mus_musculus 0 305
ENSMUST00000144551 Srsf3-004 retained_intron Mus_musculus 0 244
ENSMUST00000075650 Gm9761-201 processed_pseudogene Mus_musculus 0 195
ENSMUST00000104933 Gm12355-001 protein_coding Mus_musculus 9.80909e-45 183
ENSMUST00000118967 Gm11922-001 processed_pseudogene Mus_musculus 1.99965e-42 176

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