C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147415 Ppp1r1b-003 ENSMUSG00000061718 10090 + 11:98351215-98357391 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainMuscleOvaryPlacentaENSMUST00000147415
Transcript ID Adrenal Brain Muscle Ovary Placenta
ENSMUST00000147415 0.046±0.00 67.700±0.00 0.075±0.00 2.961±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00061T CIL_00061T_0002 CGP 11:98325415-98357796
CIL_0000TI CIL_0000TI_0003 CGP 11:98348404-98381112

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254079 PPP1R1B-001 protein_coding Homo_sapiens 0 440
ENST00000394265 PPP1R1B-005 protein_coding Homo_sapiens 0 440
ENST00000394267 PPP1R1B-002 protein_coding Homo_sapiens 0 440
ENST00000580772 PPP1R1B-011 retained_intron Homo_sapiens 4e-16 90
ENST00000580825 PPP1R1B-013 protein_coding Homo_sapiens 0 412
ENST00000582680 PPP1R1B-014 protein_coding Homo_sapiens 0 189
ENST00000583446 PPP1R1B-012 retained_intron Homo_sapiens 0 302

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