C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147441 Cdk12-006 ENSMUSG00000003119 10090 + 11:98241737-98278504 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147441 1.989±0.02 1.779±0.58 4.982±0.37 4.206±0.10 2.780±1.16 2.852±0.75 1.130±0.26 2.116±0.36 2.796±1.35 2.817±0.38 0.916±0.39 2.783±1.58 2.531±0.00 3.962±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_0007D3 CIL_0007D3_0002 CGP 11:98152154-98278504
CIL_0007D4 CIL_0007D4_0002 CGP 11:98203059-98329648

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000430627 CDK12-008 protein_coding Homo_sapiens 0 1541
ENST00000447079 CDK12-001 protein_coding Homo_sapiens 0 1376
ENST00000559663 CDK12-002 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000584336 CDK12-007 retained_intron Homo_sapiens 0 612
ENST00000584632 CDK12-010 protein_coding Homo_sapiens 0 702

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