C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147650 Tanc1-006 ENSMUSG00000035168 10090 + 2:59841740-59845715 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147650 4.876±1.24 1.954±0.65 5.147±0.42 0.675±0.01 2.611±0.58 3.498±0.89 1.217±0.03 6.982±1.50 0.639±0.21 6.846±0.55 0.595±0.14 7.872±0.93 3.102±1.14 3.558±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0005U4 CIL_0005U4_0002 CGP 2:59484653-59846149
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361
CIL_0005U3 CIL_0005U3_0002 CGP 2:59612042-59882591

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263635 TANC1-001 protein_coding Homo_sapiens 0 1347
ENST00000454300 TANC1-201 protein_coding Homo_sapiens 0 484
ENST00000470074 TANC1-004 retained_intron Homo_sapiens 0 1347
ENST00000496406 TANC1-005 retained_intron Homo_sapiens 0 1356

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