C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: musashi RNA-binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148013 Msi2-007 ENSMUSG00000069769 10090 - 11:88365515-88590147 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DL CIL_0009DL_0002 VISTA 11:87880548-88481652
CIL_0009DM CIL_0009DM_0002 VISTA 11:87974079-88576075
CIL_0007PL CIL_0007PL_0002 UCNEbase 11:88049942-88585488
CIL_0007R8 CIL_0007R8_0002 VISTA 11:88167358-88768721
CIL_0008GV CIL_0008GV_0002 VISTA 11:88227850-88829479
CIL_000880 CIL_000880_0002 VISTA 11:88254791-88855816
CIL_00039S CIL_00039S_0002 CGP 11:88339382-88864586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100194 msi2b-001 protein_coding Danio_rerio 0 401
ENSDART00000050649 msi2b-005 protein_coding Danio_rerio 0 394
ENSDART00000099473 msi2a-201 protein_coding Danio_rerio 0 375
ENSDART00000132096 msi2a-001 protein_coding Danio_rerio 0 375
ENSDART00000145918 msi2b-015 protein_coding Danio_rerio 0 353
ENSDART00000156160 msi2b-008 protein_coding Danio_rerio 0 353
ENSDART00000154714 msi2b-004 protein_coding Danio_rerio 0 327
ENSDART00000152414 msi2b-011 protein_coding Danio_rerio 0 316
ENSDART00000156914 msi2b-003 protein_coding Danio_rerio 0 311
ENSDART00000141183 msi2a-003 retained_intron Danio_rerio 0 267
ENST00000284073 MSI2-001 protein_coding Homo_sapiens 0 686
ENST00000322684 MSI2-003 protein_coding Homo_sapiens 0 623
ENST00000416426 MSI2-002 protein_coding Homo_sapiens 0 684
ENST00000442934 MSI2-005 protein_coding Homo_sapiens 0 686
ENST00000577241 MSI2-015 retained_intron Homo_sapiens 0 287
ENST00000579180 MSI2-006 protein_coding Homo_sapiens 0 623
ENST00000579205 MSI2-011 processed_transcript Homo_sapiens 0 435
ENST00000579505 MSI2-013 processed_transcript Homo_sapiens 0 555
ENST00000582772 MSI2-012 processed_transcript Homo_sapiens 0 204

Loading