C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148750 Slc4a4-001 ENSMUSG00000060961 10090 + 5:88886818-89239653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000148750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000148750 1.648±0.36 2.087±0.59 0.786±0.06 3.313±1.10 1.763±0.57 8.037±1.66 1.171±0.37 85.464±7.52 5.449±4.86 1.591±0.47 1.016±0.37 2.530±0.86 1.427±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D8 CIL_0000D8_0002 CGP 5:88764996-89239653
CIL_0000D9 CIL_0000D9_0002 CGP 5:88886818-89457898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005452 IEA inorganic anion exchanger activity
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006814 IDA sodium ion transport
GO:0006885 TAS regulation of pH
GO:0008510 ISS sodium:bicarbonate symporter activity
GO:0015701 IGI bicarbonate transport
GO:0016323 ISS basolateral plasma membrane
GO:0035725 ISS sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264485 SLC4A4-002 protein_coding Homo_sapiens 0 5062
ENST00000340595 SLC4A4-001 protein_coding Homo_sapiens 0 4601
ENST00000351898 SLC4A4-003 protein_coding Homo_sapiens 0 3121
ENST00000425175 SLC4A4-201 protein_coding Homo_sapiens 0 4017
ENST00000512686 SLC4A4-004 protein_coding Homo_sapiens 0 2117
ENST00000514331 SLC4A4-005 processed_transcript Homo_sapiens 0 2314

Loading