C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell adhesion molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148925 Cadm1-009 ENSMUSG00000032076 10090 + 9:47530352-47792583 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JB CIL_0007JB_0009 UCNEbase 9:46899838-48183264
CIL_000803 CIL_000803_0002 VISTA 9:46978512-47582714
CIL_00080B CIL_00080B_0002 VISTA 9:47076512-47677360

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331581 CADM1-003 protein_coding Homo_sapiens 0 381
ENST00000452722 CADM1-001 protein_coding Homo_sapiens 0 381
ENST00000536727 CADM1-006 protein_coding Homo_sapiens 0 381
ENST00000536781 CADM1-012 processed_transcript Homo_sapiens 0 191
ENST00000537058 CADM1-005 protein_coding Homo_sapiens 0 381
ENST00000537140 CADM1-004 processed_transcript Homo_sapiens 0 381
ENST00000540951 CADM1-021 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000541434 CADM1-007 retained_intron Homo_sapiens 0 342
ENST00000542447 CADM1-002 protein_coding Homo_sapiens 0 381
ENST00000542450 CADM1-015 protein_coding Homo_sapiens 0 211
ENST00000543249 CADM1-010 protein_coding Homo_sapiens 0 211
ENST00000543540 CADM1-013 protein_coding Homo_sapiens 0 211
ENST00000545094 CADM1-014 protein_coding Homo_sapiens 0 211
ENST00000545380 CADM1-008 protein_coding Homo_sapiens 0 333
ENST00000612235 CADM1-201 protein_coding Homo_sapiens 0 211
ENST00000612471 CADM1-202 protein_coding Homo_sapiens 0 211
ENST00000616271 CADM1-203 protein_coding Homo_sapiens 0 211
ENST00000621043 CADM1-204 protein_coding Homo_sapiens 0 211
ENST00000621709 CADM1-205 protein_coding Homo_sapiens 0 211

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