C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spectrin alpha, non-erythrocytic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149038 Sptan1-008 ENSMUSG00000057738 10090 + 2:30001884-30008100 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149038
Transcript ID Testis
ENSMUST00000149038 80.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EB CIL_0007EB_0002 CGP 2:29935426-30031451
CIL_0002LY CIL_0002LY_0003 CGP 2:29965560-30048881

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102256 spna2-201 protein_coding Danio_rerio 0 472
ENSDART00000102251 spna2-001 protein_coding Danio_rerio 0 472
ENST00000358161 SPTAN1-201 protein_coding Homo_sapiens 0 843
ENST00000372731 SPTAN1-004 protein_coding Homo_sapiens 0 843
ENST00000372739 SPTAN1-005 protein_coding Homo_sapiens 0 843
ENST00000475367 SPTAN1-006 processed_transcript Homo_sapiens 0 484

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