C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: structural maintenance of chromosomes 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149174 Smc4-008 ENSMUSG00000034349 10090 + 3:69024194-69027900 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149174
Transcript ID Testis
ENSMUST00000149174 505.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0003 CGP 3:68892499-69034623
CIL_0004JQ CIL_0004JQ_0003 CGP 3:69004738-69044755

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344722 SMC4-007 protein_coding Homo_sapiens 0 446
ENST00000357388 SMC4-001 protein_coding Homo_sapiens 0 446
ENST00000462668 SMC4-008 retained_intron Homo_sapiens 0 446
ENST00000462787 SMC4-006 protein_coding Homo_sapiens 0 446
ENST00000469762 SMC4-003 protein_coding Homo_sapiens 0 446
ENST00000469858 SMC4-004 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000484799 SMC4-027 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000497203 SMC4-023 retained_intron Homo_sapiens 0 207

Loading