C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine/arginine-rich splicing factor 9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000149510  |
Srsf9-004 |
ENSMUSG00000029538 |
10090 | + |
5:115330578-115333009  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZA | CIL_0007ZA_0002 | VISTA | 5:114966986-115567561 |
| CIL_0009CQ | CIL_0009CQ_0002 | VISTA | 5:115188390-115791906 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000229390
|
SRSF9-001 | protein_coding | Homo_sapiens | 0 | 518 |
|
ENST00000399149
|
SRSF9P1-001 | processed_pseudogene | Homo_sapiens | 0 | 327 |
|
ENST00000546942
|
SRSF9-002 | retained_intron | Homo_sapiens | 8e-24 | 115 |
|
ENST00000548326
|
SRSF9-004 | retained_intron | Homo_sapiens | 0 | 274 |
|
ENST00000548792
|
SRSF9-003 | retained_intron | Homo_sapiens | 0 | 516 |
|
ENST00000550458
|
SRSF9-005 | protein_coding | Homo_sapiens | 0 | 198 |
|
ENST00000551765
|
GATC-001 | protein_coding | Homo_sapiens | 0 | 274 |
|
ENST00000560043
|
RP11-752G15.4-001 | processed_pseudogene | Homo_sapiens | 0 | 388 |
|
ENST00000603963
|
SRSF9-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 693 |
