C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serine/arginine-rich splicing factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603963 SRSF9-006 ENSG00000111786 9606 - 12:120461762-120469639 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000603963
Transcript ID Muscle
ENST00000603963 1.907±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144000 Srsf9-002 processed_transcript Mus_musculus 0 872
ENSMUST00000149510 Srsf9-004 protein_coding Mus_musculus 0 693
ENSMUST00000031513 Srsf9-001 protein_coding Mus_musculus 0 569
ENSMUST00000142318 Srsf9-003 processed_transcript Mus_musculus 0 370

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