C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548326 SRSF9-004 ENSG00000111786 9606 - 12:120461693-120463396 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000548326
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000548326 7.500±0.00 12.785±0.00 4.180±0.00 11.312±1.88 6.706±0.77 7.752±1.88 2.649±0.96 9.803±4.46 5.159±0.00 5.362±0.00 2.672±0.85 10.166±3.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149510 Srsf9-004 protein_coding Mus_musculus 0 274
ENSMUST00000144000 Srsf9-002 processed_transcript Mus_musculus 0 274
ENSMUST00000031513 Srsf9-001 protein_coding Mus_musculus 0 274
ENSMUST00000142318 Srsf9-003 processed_transcript Mus_musculus 2e-26 124

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