C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149796 Rer1-002 ENSMUSG00000029048 10090 - 4:155074110-155086371 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149796
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149796 10.811±1.58 14.280±3.93 8.710±2.38 4.938±2.81 12.265±1.06 12.114±0.74 6.295±1.02 9.538±1.85 12.850±1.58 9.345±0.68 7.279±0.96 9.322±1.93 12.623±2.70 9.392±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306256 RER1-008 protein_coding Homo_sapiens 0 686
ENST00000378512 RER1-002 protein_coding Homo_sapiens 0 499
ENST00000378513 RER1-201 protein_coding Homo_sapiens 0 963
ENST00000378518 RER1-004 protein_coding Homo_sapiens 0 248
ENST00000443438 RER1-006 protein_coding Homo_sapiens 0 604
ENST00000462129 RER1-007 retained_intron Homo_sapiens 0 353
ENST00000488353 RER1-003 protein_coding Homo_sapiens 0 813
ENST00000493207 RER1-005 retained_intron Homo_sapiens 1e-25 121
ENST00000605895 RER1-001 protein_coding Homo_sapiens 0 965

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