C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150096 Ptprf-002 ENSMUSG00000033295 10090 - 4:118209005-118236445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaENSMUST00000150096
Transcript ID Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENSMUST00000150096 3.777±0.45 11.877±8.37 5.770±0.56 21.252±6.33 0.437±0.00 17.611±0.00 0.277±0.00 10.748±1.44 5.831±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000083314 ptprfb-001 protein_coding Danio_rerio 0 1428
ENST00000359947 PTPRF-001 protein_coding Homo_sapiens 0 2937
ENST00000372407 PTPRF-005 protein_coding Homo_sapiens 0 4346
ENST00000412568 PTPRF-014 protein_coding Homo_sapiens 0 5118
ENST00000414879 PTPRF-006 protein_coding Homo_sapiens 0 4108
ENST00000429895 PTPRF-015 protein_coding Homo_sapiens 0 2937
ENST00000438120 PTPRF-002 protein_coding Homo_sapiens 0 2678
ENST00000463041 PTPRF-012 processed_transcript Homo_sapiens 0 278
ENST00000477970 PTPRF-007 processed_transcript Homo_sapiens 0 1696
ENST00000496447 PTPRF-008 processed_transcript Homo_sapiens 0 2937

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