C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150289 Col12a1-006 ENSMUSG00000032332 10090 - 9:79692028-79718720 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000150289
Transcript ID Adrenal Ovary
ENSMUST00000150289 1.638±0.41 4.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061X CIL_00061X_0003 CGP 9:78615546-79718831
CIL_000624 CIL_000624_0004 CGP 9:79598991-79759853

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322507 COL12A1-001 protein_coding Homo_sapiens 0 3064
ENST00000416123 COL12A1-009 protein_coding Homo_sapiens 0 3038
ENST00000483888 COL12A1-003 protein_coding Homo_sapiens 0 3064
ENST00000486533 COL12A1-004 retained_intron Homo_sapiens 0 1591
ENST00000611354 COL12A1-201 protein_coding Homo_sapiens 0 3064
ENST00000615798 COL12A1-202 protein_coding Homo_sapiens 0 3064

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