C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired related homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150299 Prrx2-003 ENSMUSG00000039476 10090 + 2:30845444-30878657 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungTestisENSMUST00000150299
Transcript ID Adrenal Breast Kidney Liver Lung Testis
ENSMUST00000150299 0.611±0.18 6.894±0.00 1.230±0.00 0.110±0.09 0.892±0.09 0.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UD CIL_0005UD_0002 CGP 2:30823097-30881251
CIL_0005UC CIL_0005UC_0002 CGP 2:30834972-30929863

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131637 prrx1b-002 protein_coding Danio_rerio 5e-23 111
ENSDART00000061588 prrx1b-001 protein_coding Danio_rerio 5e-23 111
ENST00000372469 PRRX2-001 protein_coding Homo_sapiens 0 372

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