C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 23 (nucleobase transporters), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150877 Slc23a1-002 ENSMUSG00000024354 10090 - 18:35619374-35627196 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000150877
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000150877 3.315±2.39 0.144±0.00 1.015±0.48 0.074±0.00 0.125±0.00 78.329±25.97 15.175±13.82 4.833±0.93 7.949±3.14 12.634±2.05 0.704±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0002 CGP 18:35562146-35617186
CIL_000542 CIL_000542_0002 CGP 18:35598617-35627244
CIL_000543 CIL_000543_0002 CGP 18:35614604-35649367

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348729 SLC23A1-001 protein_coding Homo_sapiens 0 2015
ENST00000353963 SLC23A1-002 protein_coding Homo_sapiens 0 1960
ENST00000503919 SLC23A1-007 processed_transcript Homo_sapiens 0 433
ENST00000506512 SLC23A1-008 retained_intron Homo_sapiens 0 211
ENST00000508270 SLC23A1-005 protein_coding Homo_sapiens 0 315

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