C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 23 (ascorbic acid transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508270 SLC23A1-005 ENSG00000170482 9606 - 5:139381913-139384553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000508270
Transcript ID Brain Placenta Testis
ENST00000508270 0.552±0.00 0.194±0.00 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0001 CGP 5:139273752-139369720
CIL_000542 CIL_000542_0001 CGP 5:139341587-139384553
CIL_000543 CIL_000543_0001 CGP 5:139367196-139390081

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150877 Slc23a1-002 nonsense_mediated_decay Mus_musculus 0 315
ENSMUST00000025212 Slc23a1-001 protein_coding Mus_musculus 0 309

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