C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150946 Snf8-003 ENSMUSG00000006058 10090 + 11:96034951-96039878 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000150946
Transcript ID Liver
ENSMUST00000150946 20.843±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290330 SNF8-002 protein_coding Homo_sapiens 0 416
ENST00000502492 SNF8-001 protein_coding Homo_sapiens 0 416
ENST00000507302 SNF8-007 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000509995 SNF8-008 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000510195 SNF8-005 retained_intron Homo_sapiens 0 416
ENST00000510558 SNF8-006 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000512243 SNF8-009 retained_intron Homo_sapiens 0 315
ENST00000514929 SNF8-004 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000573795 SNF8-017 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000576353 SNF8-016 nonsense_mediated_decay Homo_sapiens 0 220

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