C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SNF8, ESCRT-II complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000576353 SNF8-016 ENSG00000159210 9606 - 17:48930504-48944825 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyOvaryPlacentaTestisENST00000576353
Transcript ID Adipose Adrenal Breast Heart Kidney Ovary Placenta Testis
ENST00000576353 26.858±0.00 25.278±0.00 14.539±12.13 14.870±0.00 13.177±11.73 17.748±0.43 18.837±3.66 20.785±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006217 Snf8-001 protein_coding Mus_musculus 0 651
ENSMUST00000156394 Snf8-006 processed_transcript Mus_musculus 0 416
ENSMUST00000156524 Snf8-004 processed_transcript Mus_musculus 0 220
ENSMUST00000150946 Snf8-003 processed_transcript Mus_musculus 0 220
ENSMUST00000107700 Snf8-005 protein_coding Mus_musculus 0 213
ENSMUST00000145749 Snf8-002 processed_transcript Mus_musculus 3e-31 139

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