C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150970 Ergic3-004 ENSMUSG00000005881 10090 + 2:156016509-156018150 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryENSMUST00000150970
Transcript ID Breast Colon Lung Ovary
ENSMUST00000150970 55.222±6.99 75.110±7.94 55.306±1.23 133.134±37.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0005FV CIL_0005FV_0002 CGP 2:155973279-156018279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348547 ERGIC3-001 protein_coding Homo_sapiens 0 582
ENST00000357394 ERGIC3-003 protein_coding Homo_sapiens 0 582
ENST00000413587 ERGIC3-017 protein_coding Homo_sapiens 0 326
ENST00000416206 ERGIC3-006 protein_coding Homo_sapiens 0 582
ENST00000442139 ERGIC3-008 protein_coding Homo_sapiens 0 279
ENST00000451605 ERGIC3-015 protein_coding Homo_sapiens 0 418
ENST00000465298 ERGIC3-020 retained_intron Homo_sapiens 0 368
ENST00000475211 ERGIC3-021 retained_intron Homo_sapiens 1e-24 117
ENST00000482338 ERGIC3-014 processed_transcript Homo_sapiens 0 244
ENST00000488384 ERGIC3-016 retained_intron Homo_sapiens 0 348
ENST00000488935 ERGIC3-009 processed_transcript Homo_sapiens 0 270
ENST00000496172 ERGIC3-013 retained_intron Homo_sapiens 0 228

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