C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy related 16-like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151037 Atg16l1-003 ENSMUSG00000026289 10090 + 1:87756088-87792425 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainENSMUST00000151037
Transcript ID Bladder Brain
ENSMUST00000151037 2.226±0.00 3.997±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HZ CIL_0003HZ_0002 CGP 1:87620312-87792428
CIL_0004L2 CIL_0004L2_0003 CGP 1:87755870-87845158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347464 ATG16L1-201 protein_coding Homo_sapiens 0 658
ENST00000373525 ATG16L1-004 protein_coding Homo_sapiens 0 614
ENST00000392017 ATG16L1-001 protein_coding Homo_sapiens 0 1048
ENST00000392018 ATG16L1-005 protein_coding Homo_sapiens 0 1770
ENST00000392020 ATG16L1-003 protein_coding Homo_sapiens 0 942
ENST00000392021 ATG16L1-002 nonsense_mediated_decay Homo_sapiens 0 1035
ENST00000417017 ATG16L1-013 protein_coding Homo_sapiens 0 492
ENST00000419681 ATG16L1-006 protein_coding Homo_sapiens 0 289
ENST00000431917 ATG16L1-012 protein_coding Homo_sapiens 0 327
ENST00000444735 ATG16L1-007 protein_coding Homo_sapiens 0 455
ENST00000464645 ATG16L1-017 processed_transcript Homo_sapiens 0 536
ENST00000472242 ATG16L1-018 retained_intron Homo_sapiens 0 361
ENST00000473865 ATG16L1-019 retained_intron Homo_sapiens 0 623
ENST00000474148 ATG16L1-008 retained_intron Homo_sapiens 0 944
ENST00000479942 ATG16L1-009 retained_intron Homo_sapiens 0 1048
ENST00000485623 ATG16L1-014 retained_intron Homo_sapiens 0 490
ENST00000492298 ATG16L1-016 retained_intron Homo_sapiens 0 270
ENST00000498620 ATG16L1-015 processed_transcript Homo_sapiens 0 520

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