C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase, POLQ-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151201 Helq-002 ENSMUSG00000035266 10090 - 5:100783180-100798577 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaENSMUST00000151201
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta
ENSMUST00000151201 1.064±0.40 1.303±0.00 1.265±0.02 1.477±0.49 0.658±0.00 0.352±0.18 2.133±0.31 2.712±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JB CIL_0006JB_0002 CGP 5:100679484-100798598
CIL_000820 CIL_000820_0002 VISTA 5:100731954-101333223
CIL_0006JA CIL_0006JA_0002 CGP 5:100762145-100804471

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006259 ISO DNA metabolic process
GO:0017116 ISO single-stranded DNA-dependent ATP-dependent DNA helicase activity
GO:0017117 ISO single-stranded DNA-dependent ATP-dependent DNA helicase complex
GO:0032508 ISO DNA duplex unwinding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295488 HELQ-001 protein_coding Homo_sapiens 0 628
ENST00000508591 HELQ-003 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000510985 HELQ-002 protein_coding Homo_sapiens 0 425

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