C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151656 Psmf1-004 ENSMUSG00000032869 10090 - 2:151719485-151729960 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000151656
Transcript ID Testis
ENSMUST00000151656 317.758±30.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246015 PSMF1-003 protein_coding Homo_sapiens 0 468
ENST00000333082 PSMF1-201 protein_coding Homo_sapiens 0 468
ENST00000335877 PSMF1-006 protein_coding Homo_sapiens 0 468
ENST00000381898 PSMF1-010 protein_coding Homo_sapiens 0 309
ENST00000435720 PSMF1-004 protein_coding Homo_sapiens 0 235
ENST00000479715 PSMF1-001 processed_transcript Homo_sapiens 0 353
ENST00000484891 PSMF1-005 processed_transcript Homo_sapiens 0 669

Loading