C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6152
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151704 Gm6152-001 ENSMUSG00000086195 10090 - 1:8855928-8856267 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonPlacentaENSMUST00000151704
Transcript ID Adipose Adrenal Bladder Brain Colon Placenta
ENSMUST00000151704 0.182±0.00 0.237±0.00 0.091±0.00 0.135±0.01 0.394±0.16 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273480 RNF7-001 protein_coding Homo_sapiens 0 399
ENST00000393000 RNF7-002 protein_coding Homo_sapiens 0 355
ENST00000477012 RNF7-003 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000477393 RNF7-004 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000480908 RNF7-007 protein_coding Homo_sapiens 5.60519e-45 185
ENST00000498828 RNF7-006 retained_intron Homo_sapiens 0 191

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